How the atlas was made
The reference skeleton is loaded as its actual triangle meshes, one per structure, so what you spin is the bone itself, not a picture of it. The soft-tissue surface is a canonical face registered to that skull at published thicknesses. Every overlay is constructed in millimetres from landmarks derived from the geometry and projected nowhere: it sits in the same space as the bone. Full method on the sources page.
Real millimetres
This reference skull measures 128 mm across the zygomatic arches and 77 mm across the mandibular angles on bone; the surface carries the published soft-tissue thicknesses on top. Distances quoted in the detail panel are from the cited studies, not from this model.
One reference, not every man
A single reference individual cannot show variation. Vessel courses are schematic paths through measured waypoints; depth relative to the mimetic muscles varies by region and by person, which is exactly why the Codex keeps its structural steps on bone and its superficial step blunt and slow.